Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Gm27838-201ENSMUST00000184829 128 ntBASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sft2d3Q9CSV6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sft2d3Q9CSV6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gm14719-201ENSMUST00000121891 340 ntBASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gm15487-201ENSMUST00000122373 465 ntBASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 AA619741-201ENSMUST00000195095 646 ntBASIC11.8□□□□□ -0.52
Sft2d3Q9CSV6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms