Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm12997-201ENSMUST00000120207 640 ntBASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm37489-201ENSMUST00000191883 159 ntBASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm16372-201ENSMUST00000073088 450 ntBASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldnd1Q9CQX5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Gm5363-201ENSMUST00000211927 938 ntBASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldnd1Q9CQX5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm25668-201ENSMUST00000157700 129 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm20482-202ENSMUST00000174729 825 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldnd1Q9CQX5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms