Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTRAFQ9CQE8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTRAFQ9CQE8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm12895-201ENSMUST00000122214 226 ntBASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm11780-201ENSMUST00000136880 516 ntBASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm4535-201ENSMUST00000182274 558 ntBASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Gm10355-201ENSMUST00000097146 517 ntBASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
RTRAFQ9CQE8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms