Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Gm2756-201ENSMUST00000195851 400 ntBASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Matn2-206ENSMUST00000228570 2798 ntBASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb1Q9CQ70 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
H2afb1Q9CQ70 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.33□□□□□ -0.59
H2afb1Q9CQ70 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
H2afb1Q9CQ70 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Acot6-202ENSMUST00000222921 3622 ntBASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Gm24543-201ENSMUST00000103867 82 ntBASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
H2afb1Q9CQ70 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm15653-201ENSMUST00000119247 907 ntBASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm25925-201ENSMUST00000158314 306 ntBASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm2213-201ENSMUST00000197485 688 ntBASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gm6916-202ENSMUST00000205523 195 ntBASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb1Q9CQ70 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms