Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Gm15460-201ENSMUST00000118147 391 ntBASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Gm43575-201ENSMUST00000196420 516 ntBASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.77■□□□□ 0.12
Trim11Q99PQ2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim11Q99PQ2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim11Q99PQ2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim11Q99PQ2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim11Q99PQ2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Gm27430-201ENSMUST00000184585 107 ntBASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Gm44333-201ENSMUST00000197168 107 ntBASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Gm9229-201ENSMUST00000222777 126 ntBASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim11Q99PQ2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Gm14701-201ENSMUST00000117156 348 ntBASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Gm25948-201ENSMUST00000175334 112 ntBASIC15.75■□□□□ 0.11
Trim11Q99PQ2 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.75■□□□□ 0.11
Trim11Q99PQ2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Mir698-201ENSMUST00000102164 109 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms