Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdh23Q99PF4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.77□□□□□ -0.21
Cdh23Q99PF4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gm11597-201ENSMUST00000121423 964 ntBASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gm27552-201ENSMUST00000183351 62 ntBASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gm27844-201ENSMUST00000183613 62 ntBASIC13.77□□□□□ -0.21
Cdh23Q99PF4 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdh23Q99PF4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh23Q99PF4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm19163-201ENSMUST00000223313 780 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdh23Q99PF4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Gm11637-201ENSMUST00000120601 592 ntBASIC13.74□□□□□ -0.21
Cdh23Q99PF4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms