Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tpgs1Q99MS8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gm12485-201ENSMUST00000119641 291 ntBASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gm37917-201ENSMUST00000194711 392 ntBASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gm15823-201ENSMUST00000064305 670 ntBASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpgs1Q99MS8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Gm18624-201ENSMUST00000220966 658 ntBASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpgs1Q99MS8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Gm12341-201ENSMUST00000119724 503 ntBASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Gm15376-201ENSMUST00000122258 783 ntBASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Gm45668-201ENSMUST00000211271 493 ntBASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpgs1Q99MS8 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms