Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gm12217-201ENSMUST00000118858 696 ntBASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gm16397-201ENSMUST00000122201 494 ntBASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gm8194-201ENSMUST00000159783 859 ntBASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gm43094-201ENSMUST00000196549 921 ntBASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col25a1Q99MQ5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Gm11524-201ENSMUST00000119349 807 ntBASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Mir6927-201ENSMUST00000184494 71 ntBASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Gm18212-201ENSMUST00000211678 889 ntBASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col25a1Q99MQ5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 BC001981-202ENSMUST00000191393 1545 ntBASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col25a1Q99MQ5 Gm14277-201ENSMUST00000121195 360 ntBASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Gm25951-201ENSMUST00000175330 64 ntBASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Gm44100-201ENSMUST00000204329 436 ntBASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms