Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1b1Q99LU0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1b1Q99LU0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1b1Q99LU0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1b1Q99LU0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1b1Q99LU0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chmp1b1Q99LU0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Gm8584-201ENSMUST00000171982 758 ntBASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.1□□□□□ -0.31
Chmp1b1Q99LU0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gm13616-201ENSMUST00000120600 222 ntBASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gm12882-201ENSMUST00000121696 517 ntBASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gm9719-201ENSMUST00000162765 543 ntBASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 AA543401-201ENSMUST00000164248 1269 ntBASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Mir6956-201ENSMUST00000183598 62 ntBASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp1b1Q99LU0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp1b1Q99LU0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.08□□□□□ -0.31
Chmp1b1Q99LU0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp1b1Q99LU0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp1b1Q99LU0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp1b1Q99LU0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp1b1Q99LU0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp1b1Q99LU0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm6415-201ENSMUST00000118488 348 ntBASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm25925-201ENSMUST00000158314 306 ntBASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm25948-201ENSMUST00000175334 112 ntBASIC13.08□□□□□ -0.32
Chmp1b1Q99LU0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms