Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Gm44346-201ENSMUST00000198851 141 ntBASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Dupd1-202ENSMUST00000224735 548 ntBASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smtnl1Q99LM3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Matn2-206ENSMUST00000228570 2798 ntBASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Gm29541-201ENSMUST00000191351 678 ntBASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Gm43474-201ENSMUST00000196415 774 ntBASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smtnl1Q99LM3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Gm16476-201ENSMUST00000221544 139 ntBASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smtnl1Q99LM3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Gm10253-201ENSMUST00000194270 940 ntBASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smtnl1Q99LM3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms