Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap3Q99LM2 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.33□□□□□ -0.11
Cdk5rap3Q99LM2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.11
Cdk5rap3Q99LM2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap3Q99LM2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap3Q99LM2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap3Q99LM2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap3Q99LM2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Gm8000-201ENSMUST00000188378 592 ntBASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 AW822252-206ENSMUST00000208904 237 ntBASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdk5rap3Q99LM2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Grk6-205ENSMUST00000224653 2976 ntBASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Gm18766-201ENSMUST00000189811 808 ntBASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Gm37714-201ENSMUST00000194742 342 ntBASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdk5rap3Q99LM2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gm4995-201ENSMUST00000117247 432 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Mir6990-201ENSMUST00000183724 91 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gm29541-201ENSMUST00000191351 678 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gm44771-201ENSMUST00000206975 626 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.31□□□□□ -0.12
Cdk5rap3Q99LM2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms