Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Gm4857-201ENSMUST00000192718 785 ntBASIC13.8□□□□□ -0.2
Cstf1Q99LC2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Mir8109-201ENSMUST00000184375 117 ntBASIC13.79□□□□□ -0.2
Cstf1Q99LC2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf1Q99LC2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm12485-201ENSMUST00000119641 291 ntBASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm13385-201ENSMUST00000121089 220 ntBASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm44397-201ENSMUST00000195950 113 ntBASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.78□□□□□ -0.2
Cstf1Q99LC2 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.78□□□□□ -0.2
Cstf1Q99LC2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf1Q99LC2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms