Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm43438-201ENSMUST00000198133 379 ntBASIC16.28■□□□□ 0.2
Col20a1Q923P0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col20a1Q923P0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Gm18473-201ENSMUST00000220543 868 ntBASIC16.27■□□□□ 0.2
Col20a1Q923P0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.27■□□□□ 0.2
Col20a1Q923P0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col20a1Q923P0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.27■□□□□ 0.19
Col20a1Q923P0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col20a1Q923P0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col20a1Q923P0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col20a1Q923P0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col20a1Q923P0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col20a1Q923P0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Col20a1Q923P0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Gm12390-201ENSMUST00000117897 397 ntBASIC16.26■□□□□ 0.19
Col20a1Q923P0 Gm13612-201ENSMUST00000119276 390 ntBASIC16.26■□□□□ 0.19
Col20a1Q923P0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.26■□□□□ 0.19
Col20a1Q923P0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col20a1Q923P0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col20a1Q923P0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Col20a1Q923P0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms