Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Gm5279-201ENSMUST00000199575 745 ntBASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdha9Q91Y11 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Gm42612-201ENSMUST00000197986 623 ntBASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Gm43170-201ENSMUST00000199827 612 ntBASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Gm44855-201ENSMUST00000205725 362 ntBASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha9Q91Y11 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha9Q91Y11 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms