Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb1Q91Y08 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb1Q91Y08 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Mir6956-201ENSMUST00000183598 62 ntBASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb1Q91Y08 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Gm6912-201ENSMUST00000117218 544 ntBASIC14.36□□□□□ -0.11
Pcdhb1Q91Y08 Gm4875-201ENSMUST00000118257 786 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms