Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Gm6180-201ENSMUST00000065243 498 ntBASIC14.23□□□□□ -0.13
Usp3Q91W36 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.23□□□□□ -0.13
Usp3Q91W36 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp3Q91W36 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp3Q91W36 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.22□□□□□ -0.13
Usp3Q91W36 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp3Q91W36 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.22□□□□□ -0.13
Usp3Q91W36 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC14.22□□□□□ -0.13
Usp3Q91W36 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Usp3Q91W36 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp3Q91W36 Gm19078-201ENSMUST00000206311 727 ntBASIC14.22□□□□□ -0.13
Usp3Q91W36 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.22□□□□□ -0.13
Usp3Q91W36 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp3Q91W36 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp3Q91W36 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.21□□□□□ -0.13
Usp3Q91W36 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.21□□□□□ -0.13
Usp3Q91W36 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.21□□□□□ -0.13
Usp3Q91W36 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.21□□□□□ -0.13
Usp3Q91W36 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp3Q91W36 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
Usp3Q91W36 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp3Q91W36 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp3Q91W36 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp3Q91W36 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Usp3Q91W36 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp3Q91W36 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp3Q91W36 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp3Q91W36 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.2□□□□□ -0.14
Usp3Q91W36 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Usp3Q91W36 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp3Q91W36 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp3Q91W36 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp3Q91W36 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp3Q91W36 Mir7654-201ENSMUST00000185082 70 ntBASIC14.2□□□□□ -0.14
Usp3Q91W36 Gm8515-201ENSMUST00000194852 576 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms