Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Gm20426-201ENSMUST00000173657 440 ntBASIC16.06■□□□□ 0.16
StrcQ8VIM6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Gm5051-201ENSMUST00000204085 485 ntBASIC16.06■□□□□ 0.16
StrcQ8VIM6 Gm8913-201ENSMUST00000209491 641 ntBASIC16.06■□□□□ 0.16
StrcQ8VIM6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.06■□□□□ 0.16
StrcQ8VIM6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
StrcQ8VIM6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.05■□□□□ 0.16
StrcQ8VIM6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.05■□□□□ 0.16
StrcQ8VIM6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.05■□□□□ 0.16
StrcQ8VIM6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.05■□□□□ 0.16
StrcQ8VIM6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
StrcQ8VIM6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.04■□□□□ 0.16
StrcQ8VIM6 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.04■□□□□ 0.16
StrcQ8VIM6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
StrcQ8VIM6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm37835-201ENSMUST00000193305 361 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm42997-202ENSMUST00000200321 985 ntBASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
StrcQ8VIM6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms