Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Gm12428-201ENSMUST00000119844 727 ntBASIC12.44□□□□□ -0.42
Odf4Q8VI88 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Gm27618-201ENSMUST00000183671 60 ntBASIC12.44□□□□□ -0.42
Odf4Q8VI88 Gm43767-201ENSMUST00000198933 381 ntBASIC12.44□□□□□ -0.42
Odf4Q8VI88 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.44□□□□□ -0.42
Odf4Q8VI88 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.44□□□□□ -0.42
Odf4Q8VI88 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Odf4Q8VI88 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Celf4-206ENSMUST00000224553 1729 ntBASIC12.43□□□□□ -0.42
Odf4Q8VI88 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Odf4Q8VI88 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.43□□□□□ -0.42
Odf4Q8VI88 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.43□□□□□ -0.42
Odf4Q8VI88 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.42□□□□□ -0.42
Odf4Q8VI88 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.42□□□□□ -0.42
Odf4Q8VI88 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Gm13223-201ENSMUST00000118609 747 ntBASIC12.42□□□□□ -0.42
Odf4Q8VI88 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Gm6888-201ENSMUST00000221983 706 ntBASIC12.42□□□□□ -0.42
Odf4Q8VI88 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Odf4Q8VI88 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms