Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Mir1894-201ENSMUST00000122802 81 ntBASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Mir7085-201ENSMUST00000184353 66 ntBASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gm44719-201ENSMUST00000206404 149 ntBASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx39aQ8VDW0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gm12928-201ENSMUST00000117115 573 ntBASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gm11425-201ENSMUST00000119608 498 ntBASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gm12134-201ENSMUST00000122109 520 ntBASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gm9396-201ENSMUST00000076703 567 ntBASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx39aQ8VDW0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm8463-201ENSMUST00000208573 613 ntBASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx39aQ8VDW0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms