Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc9Q8VC31 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.61■□□□□ 0.25
Ccdc9Q8VC31 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Syt7-205ENSMUST00000224135 1557 ntBASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 AC154404.1-201ENSMUST00000223601 2077 ntBASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Gm9172-201ENSMUST00000212092 954 ntBASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 AC166574.4-201ENSMUST00000227165 1937 ntBASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc9Q8VC31 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gm15165-201ENSMUST00000118140 502 ntBASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gm2451-201ENSMUST00000199447 999 ntBASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gm10290-201ENSMUST00000200451 999 ntBASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Gm18669-201ENSMUST00000216049 778 ntBASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Ccdc9Q8VC31 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms