Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Top1mtQ8R4U6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Matn2-206ENSMUST00000228570 2798 ntBASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Gm44872-201ENSMUST00000207864 420 ntBASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Top1mtQ8R4U6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Top1mtQ8R4U6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Gm44719-201ENSMUST00000206404 149 ntBASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.52■□□□□ 0.24
Top1mtQ8R4U6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Top1mtQ8R4U6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Top1mtQ8R4U6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Top1mtQ8R4U6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.52■□□□□ 0.23
Top1mtQ8R4U6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Top1mtQ8R4U6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.52■□□□□ 0.23
Top1mtQ8R4U6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Top1mtQ8R4U6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms