Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm8213-201ENSMUST00000118191 441 ntBASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm2445-201ENSMUST00000182798 989 ntBASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm27572-201ENSMUST00000183702 255 ntBASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp7Q8R1T1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm5687-201ENSMUST00000118252 640 ntBASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm16177-201ENSMUST00000120728 718 ntBASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm10156-201ENSMUST00000122364 462 ntBASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm29608-201ENSMUST00000190444 463 ntBASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp7Q8R1T1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Gm27331-201ENSMUST00000183705 60 ntBASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.59■□□□□ 0.41
Chmp7Q8R1T1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp7Q8R1T1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Chmp7Q8R1T1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp7Q8R1T1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp7Q8R1T1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.58■□□□□ 0.41
Chmp7Q8R1T1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp7Q8R1T1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.58■□□□□ 0.41
Chmp7Q8R1T1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Chmp7Q8R1T1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms