Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nudcd3Q8R1N4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Gm6973-201ENSMUST00000117080 721 ntBASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nudcd3Q8R1N4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Rpph1-201ENSMUST00000175096 319 ntBASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nudcd3Q8R1N4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nudcd3Q8R1N4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms