Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm7730-201ENSMUST00000212486 454 ntBASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gm22189-201ENSMUST00000103822 86 ntBASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gm15240-201ENSMUST00000118156 720 ntBASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gm9797-201ENSMUST00000052902 613 ntBASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3a1Q8K4Z5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Mir698-201ENSMUST00000102164 109 ntBASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Gm44855-201ENSMUST00000205725 362 ntBASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3a1Q8K4Z5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3a1Q8K4Z5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms