Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.56■□□□□ 0.08
Syne4Q8CII8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.56■□□□□ 0.08
Syne4Q8CII8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.56■□□□□ 0.08
Syne4Q8CII8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.56■□□□□ 0.08
Syne4Q8CII8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Gm10146-201ENSMUST00000072739 309 ntBASIC15.56■□□□□ 0.08
Syne4Q8CII8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syne4Q8CII8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.55■□□□□ 0.08
Syne4Q8CII8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Gm10608-202ENSMUST00000213924 676 ntBASIC15.55■□□□□ 0.08
Syne4Q8CII8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syne4Q8CII8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm7029-201ENSMUST00000173226 450 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm26461-201ENSMUST00000175064 290 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm29396-201ENSMUST00000185659 716 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Syne4Q8CII8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.54■□□□□ 0.08
Syne4Q8CII8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Gm12403-201ENSMUST00000121384 959 ntBASIC15.53■□□□□ 0.08
Syne4Q8CII8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms