Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Gm3436-201ENSMUST00000179930 840 ntBASIC14.13□□□□□ -0.15
CopaQ8CIE6 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.13□□□□□ -0.15
CopaQ8CIE6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.13□□□□□ -0.15
CopaQ8CIE6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CopaQ8CIE6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.12□□□□□ -0.15
CopaQ8CIE6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.12□□□□□ -0.15
CopaQ8CIE6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CopaQ8CIE6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Gm6218-201ENSMUST00000219812 628 ntBASIC14.11□□□□□ -0.15
CopaQ8CIE6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CopaQ8CIE6 Mir125a-201ENSMUST00000083545 68 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms