Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim5Q8CI51 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Gm5312-201ENSMUST00000203728 547 ntBASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim5Q8CI51 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm24543-201ENSMUST00000103867 82 ntBASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm29741-201ENSMUST00000192667 421 ntBASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm37714-201ENSMUST00000194742 342 ntBASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim5Q8CI51 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms