Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.85■□□□□ 0.45
Rab11fip3Q8CHD8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Gm13612-201ENSMUST00000119276 390 ntBASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.84■□□□□ 0.45
Rab11fip3Q8CHD8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rab11fip3Q8CHD8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Gm27839-201ENSMUST00000184242 106 ntBASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rab11fip3Q8CHD8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Gm38671-201ENSMUST00000200573 130 ntBASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rab11fip3Q8CHD8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Gm10012-201ENSMUST00000078252 192 ntBASIC17.81■□□□□ 0.44
Rab11fip3Q8CHD8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms