Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Gm15467-201ENSMUST00000120582 445 ntBASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Mir1895-201ENSMUST00000122615 79 ntBASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox30Q8CGW4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm22065-201ENSMUST00000103753 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm22066-201ENSMUST00000103761 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24932-201ENSMUST00000103763 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24115-201ENSMUST00000103799 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm22190-201ENSMUST00000103827 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm22191-201ENSMUST00000103831 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24721-201ENSMUST00000103849 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm28018-201ENSMUST00000103869 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm26399-201ENSMUST00000103937 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm25349-201ENSMUST00000177728 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm23616-201ENSMUST00000177797 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm25871-201ENSMUST00000177816 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24752-201ENSMUST00000178240 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24496-201ENSMUST00000178287 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm25649-201ENSMUST00000178476 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm25548-201ENSMUST00000178681 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm23147-201ENSMUST00000178841 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm26095-201ENSMUST00000179270 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm22171-201ENSMUST00000179283 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm23936-201ENSMUST00000179354 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm22619-201ENSMUST00000179516 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm25255-201ENSMUST00000179579 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24755-201ENSMUST00000179691 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm26506-201ENSMUST00000179692 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm25086-201ENSMUST00000179931 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm23243-201ENSMUST00000180047 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24659-201ENSMUST00000180212 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm24169-201ENSMUST00000180244 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm23689-201ENSMUST00000180354 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm27359-201ENSMUST00000184153 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm27785-201ENSMUST00000184268 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm27466-201ENSMUST00000184396 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm27703-201ENSMUST00000184836 110 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox30Q8CGW4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms