Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Gm5264-201ENSMUST00000190584 848 ntBASIC17.09■□□□□ 0.33
Smc5Q8CG46 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.09■□□□□ 0.33
Smc5Q8CG46 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc5Q8CG46 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc5Q8CG46 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc5Q8CG46 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Smc5Q8CG46 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.08■□□□□ 0.33
Smc5Q8CG46 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Syt7-205ENSMUST00000224135 1557 ntBASIC17.08■□□□□ 0.32
Smc5Q8CG46 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gm43125-201ENSMUST00000201724 730 ntBASIC17.08■□□□□ 0.32
Smc5Q8CG46 AW822252-206ENSMUST00000208904 237 ntBASIC17.08■□□□□ 0.32
Smc5Q8CG46 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.08■□□□□ 0.32
Smc5Q8CG46 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.08■□□□□ 0.32
Smc5Q8CG46 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Gm10176-201ENSMUST00000159707 2264 ntBASIC17.08■□□□□ 0.32
Smc5Q8CG46 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc5Q8CG46 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm22065-201ENSMUST00000103753 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm22066-201ENSMUST00000103761 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm24932-201ENSMUST00000103763 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm24115-201ENSMUST00000103799 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm22190-201ENSMUST00000103827 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm22191-201ENSMUST00000103831 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm24721-201ENSMUST00000103849 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm28018-201ENSMUST00000103869 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm26399-201ENSMUST00000103937 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm25349-201ENSMUST00000177728 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm23616-201ENSMUST00000177797 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm25871-201ENSMUST00000177816 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm24752-201ENSMUST00000178240 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm24496-201ENSMUST00000178287 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm25649-201ENSMUST00000178476 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm25548-201ENSMUST00000178681 110 ntBASIC17.07■□□□□ 0.32
Smc5Q8CG46 Gm23147-201ENSMUST00000178841 110 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms