Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.96■□□□□ 0.3
Trim52Q8CDV4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim52Q8CDV4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim52Q8CDV4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Mir6420-201ENSMUST00000185032 102 ntBASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Gm5370-201ENSMUST00000187187 574 ntBASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim52Q8CDV4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Gm14350-201ENSMUST00000116642 640 ntBASIC16.94■□□□□ 0.3
Trim52Q8CDV4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Gm37497-201ENSMUST00000195830 798 ntBASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim52Q8CDV4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.94■□□□□ 0.3
Trim52Q8CDV4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.93■□□□□ 0.3
Trim52Q8CDV4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.93■□□□□ 0.3
Trim52Q8CDV4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Trim52Q8CDV4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Gm1335-201ENSMUST00000121653 386 ntBASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Gm37922-201ENSMUST00000195596 455 ntBASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Gm18054-201ENSMUST00000207539 555 ntBASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim52Q8CDV4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms