Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Gm2445-201ENSMUST00000182798 989 ntBASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Gm5745-201ENSMUST00000183748 313 ntBASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Gm43438-201ENSMUST00000198133 379 ntBASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Vcpip1Q8CDG3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vcpip1Q8CDG3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.86□□□□□ -0.03
Vcpip1Q8CDG3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms