Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrif1Q8CDD9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrif1Q8CDD9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Gm18737-201ENSMUST00000173594 937 ntBASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrif1Q8CDD9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.67□□□□□ -0.22
Lrif1Q8CDD9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms