Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm11543-201ENSMUST00000120758 370 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm29741-201ENSMUST00000192667 421 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Psmb5-202ENSMUST00000227257 622 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lysmd4Q8CC84 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Lysmd4Q8CC84 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lysmd4Q8CC84 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Gm20553-201ENSMUST00000204205 844 ntBASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Syt7-205ENSMUST00000224135 1557 ntBASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lysmd4Q8CC84 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.38□□□□□ -0.43
Lysmd4Q8CC84 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms