Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Uba3Q8C878 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Acot6-202ENSMUST00000222921 3622 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Uba3Q8C878 Mir698-201ENSMUST00000102164 109 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.56□□□□□ -0.08
Uba3Q8C878 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm42612-201ENSMUST00000197986 623 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm43170-201ENSMUST00000199827 612 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm17795-201ENSMUST00000214505 757 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Uba3Q8C878 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.56□□□□□ -0.08
Uba3Q8C878 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.56□□□□□ -0.08
Uba3Q8C878 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Uba3Q8C878 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Gm6912-201ENSMUST00000117218 544 ntBASIC14.55□□□□□ -0.08
Uba3Q8C878 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Gm27437-201ENSMUST00000183429 107 ntBASIC14.55□□□□□ -0.08
Uba3Q8C878 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.55□□□□□ -0.08
Uba3Q8C878 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.55□□□□□ -0.08
Uba3Q8C878 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Uba3Q8C878 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Uba3Q8C878 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Uba3Q8C878 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Uba3Q8C878 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.54□□□□□ -0.08
Uba3Q8C878 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.54□□□□□ -0.08
Uba3Q8C878 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Uba3Q8C878 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Uba3Q8C878 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms