Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Mir7070-201ENSMUST00000183657 86 ntBASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Gm13342-201ENSMUST00000121055 207 ntBASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Gm37466-201ENSMUST00000195692 652 ntBASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a6Q8C6K9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Mir497b-201ENSMUST00000093601 125 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm15371-201ENSMUST00000117057 784 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm13786-201ENSMUST00000122371 333 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm26461-201ENSMUST00000175064 290 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm6334-201ENSMUST00000207083 228 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a6Q8C6K9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms