Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cdk5rap1Q8BTW8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm15806-201ENSMUST00000120696 955 ntBASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm43094-201ENSMUST00000196549 921 ntBASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.13□□□□□ -0.31
Cdk5rap1Q8BTW8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm15678-201ENSMUST00000117573 960 ntBASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm9002-201ENSMUST00000178437 499 ntBASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm18187-201ENSMUST00000196476 984 ntBASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms