Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Usp54Q8BL06 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC19.29■□□□□ 0.68
Usp54Q8BL06 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.29■□□□□ 0.68
Usp54Q8BL06 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.29■□□□□ 0.68
Usp54Q8BL06 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC19.28■□□□□ 0.68
Usp54Q8BL06 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp54Q8BL06 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Gm43205-201ENSMUST00000198622 1968 ntBASIC19.27■□□□□ 0.68
Usp54Q8BL06 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Usp54Q8BL06 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Usp54Q8BL06 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Usp54Q8BL06 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp54Q8BL06 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC19.27■□□□□ 0.67
Usp54Q8BL06 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Usp54Q8BL06 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp54Q8BL06 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Usp54Q8BL06 Gm22121-201ENSMUST00000175148 54 ntBASIC19.27■□□□□ 0.67
Usp54Q8BL06 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Usp54Q8BL06 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC19.27■□□□□ 0.67
Usp54Q8BL06 AC069562.3-201ENSMUST00000225387 587 ntBASIC19.27■□□□□ 0.67
Usp54Q8BL06 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Usp54Q8BL06 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Usp54Q8BL06 Mir433-201ENSMUST00000093564 124 ntBASIC19.27■□□□□ 0.67
Usp54Q8BL06 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Gm11222-201ENSMUST00000119005 738 ntBASIC19.26■□□□□ 0.67
Usp54Q8BL06 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp54Q8BL06 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Gm42872-201ENSMUST00000200026 1967 ntBASIC19.25■□□□□ 0.67
Usp54Q8BL06 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Gm43068-201ENSMUST00000201095 1273 ntBASIC19.25■□□□□ 0.67
Usp54Q8BL06 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp54Q8BL06 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms