Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Gm8385-201ENSMUST00000058999 643 ntBASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Gm29608-201ENSMUST00000190444 463 ntBASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Gm15276-201ENSMUST00000145953 498 ntBASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Gm11675-201ENSMUST00000121873 832 ntBASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Gm25517-201ENSMUST00000083865 134 ntBASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smg1Q8BKX6 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm37905-201ENSMUST00000195310 341 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms