Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Ccdc40Q8BI79 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Gm10253-201ENSMUST00000194270 940 ntBASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc40Q8BI79 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 BC001981-202ENSMUST00000191393 1545 ntBASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Gm45453-201ENSMUST00000211758 853 ntBASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc40Q8BI79 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Gm5566-201ENSMUST00000116118 459 ntBASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Gm9719-201ENSMUST00000162765 543 ntBASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms