Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Gm5867-201ENSMUST00000063197 592 ntBASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn3Q8BHH8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Gm8584-201ENSMUST00000171982 758 ntBASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Gm22175-201ENSMUST00000175007 78 ntBASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn3Q8BHH8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn3Q8BHH8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn3Q8BHH8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms