Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ttc28Q80XJ3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Gm17376-201ENSMUST00000166016 84 ntBASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Gm6222-202ENSMUST00000182143 629 ntBASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Gm6082-201ENSMUST00000215204 454 ntBASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Ttc28Q80XJ3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Gm2991-201ENSMUST00000173338 480 ntBASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Gm17330-201ENSMUST00000221047 165 ntBASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ttc28Q80XJ3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms