Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nrde2Q80XC6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nrde2Q80XC6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nrde2Q80XC6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nrde2Q80XC6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nrde2Q80XC6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nrde2Q80XC6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Gm15678-201ENSMUST00000117573 960 ntBASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Mir1894-201ENSMUST00000122802 81 ntBASIC14.07□□□□□ -0.16
Nrde2Q80XC6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nrde2Q80XC6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Gm6244-201ENSMUST00000178732 841 ntBASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nrde2Q80XC6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms