Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm11543-201ENSMUST00000120758 370 ntBASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm27430-201ENSMUST00000184585 107 ntBASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm44333-201ENSMUST00000197168 107 ntBASIC13.37□□□□□ -0.27
Trim36Q80WG7 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.37□□□□□ -0.27
Trim36Q80WG7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.37□□□□□ -0.27
Trim36Q80WG7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim36Q80WG7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Mir7023-201ENSMUST00000185093 64 ntBASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.36□□□□□ -0.27
Trim36Q80WG7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.36□□□□□ -0.27
Trim36Q80WG7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.36□□□□□ -0.27
Trim36Q80WG7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim36Q80WG7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.35□□□□□ -0.27
Trim36Q80WG7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Gm45098-201ENSMUST00000207179 657 ntBASIC13.35□□□□□ -0.27
Trim36Q80WG7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim36Q80WG7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms