Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Mir497b-201ENSMUST00000093601 125 ntBASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm11524-201ENSMUST00000119349 807 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm15806-201ENSMUST00000120696 955 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm9002-201ENSMUST00000178437 499 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm18187-201ENSMUST00000196476 984 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh19Q80TF3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gm28911-201ENSMUST00000188837 117 ntBASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gm19078-201ENSMUST00000206311 727 ntBASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh19Q80TF3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms