Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vma21Q78T54 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Gm13823-201ENSMUST00000119930 345 ntBASIC11.25□□□□□ -0.61
Vma21Q78T54 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.25□□□□□ -0.61
Vma21Q78T54 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vma21Q78T54 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Vma21Q78T54 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.24□□□□□ -0.61
Vma21Q78T54 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.24□□□□□ -0.61
Vma21Q78T54 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.24□□□□□ -0.61
Vma21Q78T54 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.24□□□□□ -0.61
Vma21Q78T54 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.24□□□□□ -0.61
Vma21Q78T54 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.24□□□□□ -0.61
Vma21Q78T54 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Vma21Q78T54 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vma21Q78T54 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms