Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cspg5Q71M36 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Gm12341-201ENSMUST00000119724 503 ntBASIC14.36□□□□□ -0.11
Cspg5Q71M36 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.36□□□□□ -0.11
Cspg5Q71M36 Gm9002-201ENSMUST00000178437 499 ntBASIC14.36□□□□□ -0.11
Cspg5Q71M36 Gm28911-201ENSMUST00000188837 117 ntBASIC14.36□□□□□ -0.11
Cspg5Q71M36 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.36□□□□□ -0.11
Cspg5Q71M36 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.36□□□□□ -0.11
Cspg5Q71M36 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cspg5Q71M36 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Gm12742-201ENSMUST00000117326 410 ntBASIC14.35□□□□□ -0.11
Cspg5Q71M36 Gm12957-201ENSMUST00000117835 377 ntBASIC14.35□□□□□ -0.11
Cspg5Q71M36 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cspg5Q71M36 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.35□□□□□ -0.11
Cspg5Q71M36 AY702102-202ENSMUST00000194651 1173 ntBASIC14.35□□□□□ -0.11
Cspg5Q71M36 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.35□□□□□ -0.11
Cspg5Q71M36 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.35□□□□□ -0.11
Cspg5Q71M36 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cspg5Q71M36 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.34□□□□□ -0.11
Cspg5Q71M36 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Olfr286-202ENSMUST00000205305 969 ntBASIC14.34□□□□□ -0.11
Cspg5Q71M36 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms