Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm10012-201ENSMUST00000078252 192 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm44974-201ENSMUST00000206387 1279 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm4959-201ENSMUST00000197271 1044 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm10339-203ENSMUST00000225409 1671 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm6159-201ENSMUST00000191249 1724 ntBASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm7287-201ENSMUST00000205267 602 ntBASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm4804-201ENSMUST00000182234 999 ntBASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm18934-201ENSMUST00000216671 1044 ntBASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm45667-201ENSMUST00000210380 1316 ntBASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm22331-201ENSMUST00000158066 136 ntBASIC4.69□□□□□ -1.66
Syne1Q6ZWR6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms