Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ddx55Q6ZPL9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Gm12241-201ENSMUST00000118330 726 ntBASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Gm2445-201ENSMUST00000182798 989 ntBASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Gm29199-201ENSMUST00000187766 775 ntBASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Gm37466-201ENSMUST00000195692 652 ntBASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx55Q6ZPL9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Gm22323-201ENSMUST00000103832 109 ntBASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Gm13123-201ENSMUST00000122173 492 ntBASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ddx55Q6ZPL9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx55Q6ZPL9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms