Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Gm12363-201ENSMUST00000122250 668 ntBASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Olfr284-202ENSMUST00000206647 966 ntBASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Gm10268-201ENSMUST00000085340 555 ntBASIC16.02■□□□□ 0.16
Nup98Q6PFD9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Nup98Q6PFD9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm27516-201ENSMUST00000184237 98 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm37042-201ENSMUST00000193816 581 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm38158-201ENSMUST00000194617 339 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm13786-201ENSMUST00000122371 333 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm25261-201ENSMUST00000157416 134 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Gm3890-201ENSMUST00000182416 207 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Olfr582-201ENSMUST00000098212 960 ntBASIC16.01■□□□□ 0.15
Nup98Q6PFD9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16■□□□□ 0.15
Nup98Q6PFD9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16■□□□□ 0.15
Nup98Q6PFD9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nup98Q6PFD9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms